Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cstf3Cleavage stimulation factor subunit 3. (789 aa)    
Predicted Functional Partners:
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.998
pcf-11
Pre-mRNA cleavage complex 2 protein Pcf11.
    
 0.997
Cpsf1
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.997
Sympk
Symplekin.
   
 0.997
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.997
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.997
T06_14204
Protein CLP1-like protein.
    
 0.996
WDR33
Pre-mRNA 3' end processing protein WDR33.
   
 0.996
Fip1l1
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.996
Papolg
Poly(A) polymerase gamma.
    
 0.992
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.