STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RpS15Aa40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (140 aa)    
Predicted Functional Partners:
RPS6
40S ribosomal protein S6.
   
 0.999
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
RpS16
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
rps-25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
Gnb2l1
Guanine nucleotide-binding protein subunit beta-2-like 1.
   
 0.999
RPS4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.999
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.999
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
Rps11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.999
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.