STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_754Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
mrpl-23
Putative 39S ribosomal protein L23, mitochondrial.
   
 0.985
Mrpl17
39S ribosomal protein L17, mitochondrial.
   
 0.984
Mrps11
28S ribosomal protein S11, mitochondrial.
   
 
 0.979
MRPL12
39S ribosomal protein L12, mitochondrial.
   
 0.977
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 0.976
mrpl-19
Putative 39S ribosomal protein L19, mitochondrial.
   
 0.974
mrpl-11
Putative 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.973
mrps-16
Putative 28S ribosomal protein S16, mitochondrial.
   
 
 0.970
rplT
50S ribosomal protein L20.
   
 0.967
MRPL21
39S ribosomal protein L21, mitochondrial.
   
 0.966
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.