Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C47E12.7Ribosomal RNA processing protein 1-like protein. (375 aa)    
Predicted Functional Partners:
bop1-b
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.989
brix1
Ribosome biogenesis protein BRX1-like protein.
   
 0.987
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 0.985
Noc2l
Nucleolar complex protein 2-like protein.
   
 0.984
nop14
Putative nucleolar complex protein 14.
   
 0.983
nst-1
Guanine nucleotide-binding protein-like 3-like protein.
   
 0.983
Rpf2
Ribosome production factor 2-like protein.
   
 0.982
T06_10088
Ribosome biogenesis protein WDR12-like protein.
   
 0.982
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 0.982
F44G4.1
Brix domain-containing protein F44G4.1.
   
 0.981
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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