STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_2810Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
Uqcrb
Cytochrome b-c1 complex subunit 7.
   
 0.906
Uqcrc2
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 0.900
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
 0.886
COX6B-2
Cytochrome c oxidase subunit 6b-2.
   
 0.864
CYC1
Cytochrome c1, heme protein, mitochondrial.
   
 0.862
CYC1-2
Cytochrome c1, heme protein, mitochondrial.
   
 0.862
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.854
COX4I1
Mitochondrial cytochrome c oxidase subunit.
   
 0.852
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.832
cco-2
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.815
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.