STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tfip11Tuftelin-interacting protein 11. (964 aa)    
Predicted Functional Partners:
T06_12953
Uncharacterized protein.
    
  0.989
XAB2
Pre-mRNA-splicing factor SYF1.
   
 0.988
Dhx15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.986
F17A9.2
CWF19-like protein 1-like protein.
   
 0.985
CRNKL1
Crooked neck-like protein 1.
   
  0.984
T06_13424
CWF19-like protein 2-like protein.
    
  0.981
PAXBP1
PAX3-and PAX7-binding protein 1.
   
 0.977
T06_2962
Coiled-coil domain-containing protein-like protein.
    
 0.962
T06_4504
Protein BUD31-like protein.
    
  0.950
Prpf8
Pre-mRNA-processing-splicing factor 8.
    
 0.948
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.