Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmed1Transmembrane emp24 domain-containing protein 1. (228 aa)    
Predicted Functional Partners:
eca
Transmembrane emp24 domain-containing protein eca.
    
 
 0.891
sel-9
Suppressor/enhancer of lin-12 protein 9.
   
 
 0.816
nst-1
Guanine nucleotide-binding protein-like 3-like protein.
    
   0.515
ST7
Suppressor of tumorigenicity 7-like protein.
      
 0.477
TM9SF4
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.474
Tm9sf2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.474
Tsr1
Pre-rRNA-processing protein TSR1-like protein.
      
 0.470
Qpctl
Glutaminyl-peptide cyclotransferase-like protein.
      
 0.468
TTC7B
Tetratricopeptide repeat protein 7B.
      
 0.468
wnt11
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.444
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.