Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NrgNeuroglian. (1192 aa)    
Predicted Functional Partners:
Cntn5
Contactin-5.
   
 0.979
NFI1-2
Contactin-associated protein like 5-1.
   
 0.974
Ank2
Ankyrin-2.
    
 0.936
T06_16147
Uncharacterized protein.
    
 
 0.837
Egfr
Receptor protein-tyrosine kinase.
    
 0.805
Sntg1
Gamma-1-syntrophin.
    
 0.759
PTPN23
Tyrosine-protein phosphatase non-receptor type 23.
    
 
 0.697
LECT2
Leukocyte cell-derived chemotaxin-2.
    
 
 0.666
epha4-a
Ephrin type-A receptor 4-A.
    
 0.663
apl-1
Beta-amyloid-like protein.
   
 
 0.630
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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