Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Taf12Transcription initiation factor TFIID subunit 12. (281 aa)    
Predicted Functional Partners:
Taf7
Transcription initiation factor TFIID subunit 7.
    
 0.999
taf6
Transcription initiation factor TFIID subunit 6.
   
 0.999
TAF8
Transcription initiation factor TFIID subunit 8.
   
 0.999
TAF3
Transcription initiation factor TFIID subunit 3.
    
 0.999
TAF9
Transcription initiation factor TFIID subunit 9.
   
 0.999
TAF5
Transcription initiation factor TFIID subunit 5.
   
 0.999
TAF1
Transcription initiation factor TFIID subunit 1.
    
 0.999
taf2
Tetraspanin; Belongs to the tetraspanin (TM4SF) family.
    
 0.999
TAF4B
Transcription initiation factor TFIID subunit 4.
    
 0.999
T06_12167
Uncharacterized protein.
   
 0.998
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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