Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BPIBactericidal permeability-increasing protein. (567 aa)    
Predicted Functional Partners:
T06_15738
Vitellogenin.
     
 0.639
EGF1
Fibropellin-1.
    
 0.610
PLA2G15
Group XV phospholipase A2.
     
 0.609
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
     
 0.577
HDLBP
Vigilin.
     
 0.566
Pcyox1
Prenylcysteine oxidase.
     
  0.561
tmem66
Store-operated calcium entry-associated regulatory factor.
     
  0.561
TfIIA-S
Protein YIPF.
     
  0.561
PLA2G7
1-alkyl-2-acetylglycerophosphocholine esterase.
     
  0.561
Arfrp1
ADP-ribosylation factor-related protein 1.
     
 0.421
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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