Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slc26a2Sulfate transporter. (725 aa)    
Predicted Functional Partners:
SLC4A10-2
Anion exchange protein.
     
 0.726
MRE11A
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
  0.711
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.650
pet112
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.628
Lhcgr
Follicle-stimulating hormone receptor.
     
 0.625
ND4
NADH-ubiquinone oxidoreductase chain 4.
  
 
 0.614
adcy9
Adenylate cyclase type 9; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.587
T06_16143
Glutamate synthase [NADH], amyloplastic.
     
 0.581
ANAPC7
Ras-related protein Rab-33.
   
   0.571
RAB1A
Ras-related protein Rab-1A.
   
   0.571
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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