STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttbk1-8Tau-tubulin kinase 1. (328 aa)    
Predicted Functional Partners:
Ltv1
Protein LTV1-like protein.
    
 0.741
Tsr1
Pre-rRNA-processing protein TSR1-like protein.
    
 0.642
rps3-b
40S ribosomal protein S3-A.
    
 0.627
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.620
Per3
Period circadian-like protein 3.
    
 0.617
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.614
MRPS10
28S ribosomal protein S10, mitochondrial.
    
 0.612
RpS15Aa
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
    
  0.609
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.601
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
  0.596
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.