Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cul-2Cullin-2; Belongs to the cullin family. (1171 aa)    
Predicted Functional Partners:
rbx1
RING-box protein 1.
    
 0.998
UBXN7
UBX domain-containing protein 7.
    
 0.998
fem1c
Protein fem-1-like protein C.
    
 0.997
zer-1
Zyg eleven-related protein 1.
    
 0.997
Klhdc3
Kelch domain-containing protein 3.
    
 0.994
Tceb1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
 0.992
Tceb1-2
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
 0.992
CAND1
Cullin-associated Nedd8-dissociated protein 1.
    
 0.992
CSN5
COP9 signalosome complex subunit 5.
   
 0.977
arih1l
RBR-type E3 ubiquitin transferase.
    
 0.977
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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