STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PANK2Pantothenate kinase 2, mitochondrial. (492 aa)    
Predicted Functional Partners:
Tonsl
Tonsoku-like protein.
    
 0.974
PPCS
Phosphopantothenate--cysteine ligase.
     
 0.965
Ppcdc
Phosphopantothenoylcysteine decarboxylase.
     
 0.945
Mlx
Max-like protein X.
     
 0.937
FA2H
Fatty acid 2-hydroxylase; Belongs to the sterol desaturase family.
    
 
 0.914
Pgpep1
Pyroglutamyl-peptidase 1.
    
 
 0.905
T06_10845
Caltractin.
    
 
 0.894
Ppp1r7
Protein phosphatase 1 regulatory subunit 7.
    
 
 0.891
T06_1929
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.886
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 
 0.885
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.