Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRKCSHGlucosidase 2 subunit beta. (554 aa)    
Predicted Functional Partners:
CANX
Calnexin.
   
 0.936
SI
Sucrase-isomaltase, intestinal; Belongs to the glycosyl hydrolase 31 family.
   
 0.896
SI-2
Sucrase-isomaltase, intestinal; Belongs to the glycosyl hydrolase 31 family.
   
 0.896
Gck
Phosphotransferase.
     
  0.877
Amy2
Alpha-amylase.
   
 
  0.826
amy
Alpha-amylase.
   
 
  0.826
HSP90B1
Endoplasmin.
   
 0.788
Slc3a1
Neutral and basic amino acid transport protein rBAT.
   
 
  0.785
Mal-B1
Maltase 1.
   
 
  0.785
Sec63
Translocation protein SEC63-like protein.
      
 0.783
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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