Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bcat1Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (407 aa)    
Predicted Functional Partners:
tdcB
L-threonine dehydratase catabolic TdcB.
  
 0.979
Bckdhb
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
  
 0.969
Ankrd49
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
    
 0.964
EPRS
Bifunctional glutamate/proline--tRNA ligase.
  
 0.938
cth-2
Putative cystathionine gamma-lyase 2.
  
 0.928
ilvbl
Acetolactate synthase-like protein; Belongs to the TPP enzyme family.
  
 0.926
srr
Putative serine racemase.
  
 0.923
ldh-1
L-lactate dehydrogenase.
   
 0.908
alh-13
Putative delta-1-pyrroline-5-carboxylate synthase.
  
 
 0.904
ZK669.4
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.903
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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