Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
unc-9-2Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (823 aa)    
Predicted Functional Partners:
cul-2
Cullin-2; Belongs to the cullin family.
    
 0.589
rbx1
RING-box protein 1.
    
  0.579
Tceb1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
  0.575
Tceb1-2
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
  0.575
RpL40
Ubiquitin-60S ribosomal protein L40.
    
  0.483
UBA52
Ubiquitin-60S ribosomal protein L40.
    
  0.483
RpL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
    
  0.472
RPL27A
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
    
  0.456
Mob1b
Serine/threonine-protein phosphatase.
    
  0.456
RpL18A
60S ribosomal protein L18a.
    
  0.456
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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