Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trs-1Threonine--tRNA ligase, cytoplasmic. (1158 aa)    
Predicted Functional Partners:
mrs-1
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.980
yars
Tyrosine--tRNA ligase.
  
 
 0.971
Pigm
GPI mannosyltransferase 1.
     
 0.961
LARS
Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.950
Kars
Lysine--tRNA ligase.
  
 
 0.948
TMEM245-2
Arginine--tRNA ligase, cytoplasmic.
  
 
 0.948
EPRS
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.939
ers-1
Putative glutamine--tRNA ligase.
  
 
 0.938
PIGB
Mannosyltransferase.
     
 0.915
Vars
Valine--tRNA ligase.
  
 
 0.915
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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