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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
RPAP2Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2. (548 aa)    
Predicted Functional Partners:
RPRD1A
Regulation of nuclear pre-mRNA domain-containing protein 1A.
   
 0.989
RPRD2
Regulation of nuclear pre-mRNA domain-containing protein 2.
   
 0.983
Polr2j
DNA-directed RNA polymerase II subunit RPB11.
    
 0.982
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.981
Rpb4
DNA-directed RNA polymerase II 16 kDa polypeptide.
    
 0.981
Polr2g
DNA-directed RNA polymerase II subunit RPB7.
    
 0.981
RpII215
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.980
GPN3
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 
 0.979
rpb-10
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.976
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.976
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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