Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
tir-1Sterile alpha and TIR motif-containing protein tir-1. (1274 aa)    
Predicted Functional Partners:
NMNAT1
Nicotinamide mononucleotide adenylyltransferase 1.
    
 0.968
MET
Nicotinamide phosphoribosyltransferase.
     
 0.913
SIRT3
NAD-dependent protein deacetylase sirtuin-3, mitochondrial.
     
 0.901
SIRT1
NAD-dependent protein deacetylase sirtuin-1.
     
 0.881
Sirt4
NAD-dependent protein deacetylase sirtuin-4.
     
 0.879
NNT
NAD(P) transhydrogenase, mitochondrial.
     
 0.878
Nadk2
NAD kinase 2, mitochondrial.
     
  0.877
punA
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
 0.876
T06_2608
Putative purine nucleoside phosphorylase.
     
 0.876
C27A7.1
Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1.
     
  0.866
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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