Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stim-1Stromal interaction molecule 1. (604 aa)    
Predicted Functional Partners:
Orai2
Protein orai-2.
    
 0.997
itr-1
Inositol 1,4,5-trisphosphate receptor itr-1.
    
 0.978
Prkaa2
Non-specific serine/threonine protein kinase.
    
   0.760
PRKAB2
5'-AMP-activated protein kinase subunit beta-2.
    
   0.754
tmem66
Store-operated calcium entry-associated regulatory factor.
    
 
 0.754
sqv-3
Putative galactosyltransferase sqv-3.
    
   0.746
JPH2
Junctophilin-3.
      
 0.723
PRKAG1
5'-AMP-activated protein kinase subunit gamma-1.
    
   0.712
EcR
Ecdysone receptor.
      
 0.705
Ryr2
Ryanodine receptor 2.
      
 0.704
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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