Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
POL-24Retrovirus-related Pol polyprotein from transposon. (93 aa)    
Predicted Functional Partners:
CHD3
Chromodomain-helicase-DNA-binding protein 3.
    
 0.989
Mta2
Metastasis-associated protein MTA2.
    
 0.988
MBD2
Methyl-CpG-binding domain protein 2.
    
 0.982
Cdk2ap1
Cyclin-dependent kinase 2-associated protein 1.
    
 0.962
ATP5H
Histone-binding protein RBBP7.
    
 0.907
Caf1
Putative histone-binding protein Caf1.
    
 0.907
rba-1
Putative histone-binding protein lin-53.
    
 0.907
rbbp4
Histone-binding protein RBBP4.
    
 0.907
RBBP7
Histone-binding protein RBBP7.
    
 0.907
Caf1-2
Putative histone-binding protein Caf1.
    
 0.907
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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