Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T06_3051Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (251 aa)    
Predicted Functional Partners:
Chchd4
Mitochondrial intermembrane space import and assembly protein 40.
    
 
 0.899
PHB
Prohibitin.
    
 
 0.860
phb2
Prohibitin.
    
 
 0.859
Pum2
Pumilio-like protein 2.
    
   0.768
NUP35
Nucleoporin NUP53.
    
   0.724
MIPEP
Mitochondrial intermediate peptidase.
      
 0.723
trmt5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
      
 0.702
Xrcc5
X-ray repair cross-complementing protein 5.
     
 0.700
ymel-1
ATP-dependent zinc metalloprotease YME1-like protein; Belongs to the AAA ATPase family.
    
 
 0.683
T06_9742
Uncharacterized protein.
     
  0.673
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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