Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KAT6BHistone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1270 aa)    
Predicted Functional Partners:
BRPF1
Peregrin.
    
 0.964
Nipped-A
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
    
 0.894
RUVBL1
DNA helicase; Belongs to the RuvB family.
   
 0.893
Epc1
Enhancer of polycomb-like protein 1.
    
 0.889
ANKLE2
DNA methyltransferase 1-associated protein 1.
   
 0.884
meaf6
Chromatin modification-related protein MEAF6.
    
 0.881
ACTL6A
Actin-like protein 6A; Belongs to the actin family.
  
 0.851
Kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.843
MCRS1
Microspherule protein 1.
    
 0.840
MCRS1-2
Microspherule protein 1.
    
 0.840
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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