Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RASD2GTP-binding protein. (343 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.965
dyc-1
Dystrophin-like protein 1.
    
 0.868
unc-89-3
Muscle M-line assembly protein unc-89.
    
 0.852
Trio
Triple functional domain protein.
    
 0.836
ITSN1
Intersectin-1.
    
 0.784
Gak
Cyclin-G-associated kinase.
   
 0.766
WWC2
Protein WWC2.
    
 0.756
Rgl1
Ral guanine nucleotide dissociation stimulator-like 1.
    
 0.740
APPL1
DCC-interacting protein 13-alpha.
    
 0.729
MAP2K1
Dual specificity mitogen-activated protein kinase-like kinase; Belongs to the protein kinase superfamily.
    
 0.726
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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