Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPA1Carboxypeptidase A1. (506 aa)    
Predicted Functional Partners:
Ace-2
Angiotensin-converting enzyme.
     
 0.651
Prpf8
Pre-mRNA-processing-splicing factor 8.
    
  0.596
snr-7
Small nuclear ribonucleoprotein G.
    
  0.596
CPD
Carboxypeptidase-like protein.
  
  
 0.593
Txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
     
  0.587
prpf18
Pre-mRNA-splicing factor 18.
     
  0.574
CPD-2
Carboxypeptidase-like protein.
  
  
 0.569
CPE
Carboxypeptidase E.
  
  
 0.541
nep-2
Neprilysin-2.
     
 0.505
nep-2-2
Neprilysin-2.
     
 0.505
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.