Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Usp6nlUSP6 N-terminal-like protein. (612 aa)    
Predicted Functional Partners:
RAB43
Ras-related protein Rab-43.
    
 0.955
ANAPC7
Ras-related protein Rab-33.
    
 0.777
RAB1A
Ras-related protein Rab-1A.
    
 0.777
RAB5A
Ras-related protein Rab-5A.
    
 0.764
tmem66
Store-operated calcium entry-associated regulatory factor.
    
 
 0.656
Rab6a
Ras-related protein Rab-6A.
    
 0.622
RABGEF1
Rab5 GDP/GTP exchange factor.
   
 0.582
RAB5B
Ras-related protein Rab-5B.
    
 0.579
UBP19
Ubiquitin carboxyl-terminal hydrolase 19.
      
 0.561
TBC1D22B
TBC1 domain family member 22B.
    
 
 0.520
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.