Osgepl1 protein (Trichinella sp. T6) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

Osgepl1

Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance. (432 aa)

Predicted Functional Partners:

Lage3

0.970

Tprkb

0.969

Yrdc

0.945

Ptcd1

0.810

Pum2

0.768

EPRS

0.761

TBC1D23

0.696

Vars

0.627

Kars

0.621

RBM48

0.588

Your Current Organism:

Trichinella sp. T6

NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EPRS	Kars	A0A0V0W837	A0A0V0WBJ7	Bifunctional glutamate/proline--tRNA ligase.	Lysine--tRNA ligase.	0.999
EPRS	Osgepl1	A0A0V0W837	A0A0V0WRK7	Bifunctional glutamate/proline--tRNA ligase.	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	0.761
EPRS	Pum2	A0A0V0W837	A0A0V0WVZ3	Bifunctional glutamate/proline--tRNA ligase.	Pumilio-like protein 2.	0.823
EPRS	Tprkb	A0A0V0W837	A0A0V0WBZ0	Bifunctional glutamate/proline--tRNA ligase.	TP53RK-binding protein; Belongs to the CGI121/TPRKB family.	0.572
EPRS	Vars	A0A0V0W837	A0A0V0X9N3	Bifunctional glutamate/proline--tRNA ligase.	Valine--tRNA ligase.	0.999
EPRS	Yrdc	A0A0V0W837	A0A0V0X7R8	Bifunctional glutamate/proline--tRNA ligase.	YrdC domain-containing protein, mitochondrial.	0.570
Kars	EPRS	A0A0V0WBJ7	A0A0V0W837	Lysine--tRNA ligase.	Bifunctional glutamate/proline--tRNA ligase.	0.999
Kars	Osgepl1	A0A0V0WBJ7	A0A0V0WRK7	Lysine--tRNA ligase.	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	0.621
Kars	Pum2	A0A0V0WBJ7	A0A0V0WVZ3	Lysine--tRNA ligase.	Pumilio-like protein 2.	0.535
Kars	Vars	A0A0V0WBJ7	A0A0V0X9N3	Lysine--tRNA ligase.	Valine--tRNA ligase.	0.994
Lage3	Osgepl1	A0A0V0W2V9	A0A0V0WRK7	L antigen family member 3.	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	0.970
Lage3	Pum2	A0A0V0W2V9	A0A0V0WVZ3	L antigen family member 3.	Pumilio-like protein 2.	0.702
Lage3	Tprkb	A0A0V0W2V9	A0A0V0WBZ0	L antigen family member 3.	TP53RK-binding protein; Belongs to the CGI121/TPRKB family.	0.997
Lage3	Yrdc	A0A0V0W2V9	A0A0V0X7R8	L antigen family member 3.	YrdC domain-containing protein, mitochondrial.	0.690
Osgepl1	EPRS	A0A0V0WRK7	A0A0V0W837	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	Bifunctional glutamate/proline--tRNA ligase.	0.761
Osgepl1	Kars	A0A0V0WRK7	A0A0V0WBJ7	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	Lysine--tRNA ligase.	0.621
Osgepl1	Lage3	A0A0V0WRK7	A0A0V0W2V9	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	L antigen family member 3.	0.970
Osgepl1	Ptcd1	A0A0V0WRK7	A0A0V0XAP5	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	Pentatricopeptide repeat-containing protein 1, mitochondrial.	0.810
Osgepl1	Pum2	A0A0V0WRK7	A0A0V0WVZ3	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	Pumilio-like protein 2.	0.768
Osgepl1	RBM48	A0A0V0WRK7	A0A0V0W995	Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.	RNA-binding protein 48.	0.588

page 1 of 3

Server load: medium (48%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About