Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_10341Uncharacterized protein. (94 aa)    
Predicted Functional Partners:
spt-4
Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.
    
 
 0.694
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.689
RPS19S
40S ribosomal protein S19S.
    
   0.687
rpl-17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
    
   0.678
rpl-22
60S ribosomal protein L22.
    
   0.678
RpL13A
60S ribosomal protein L13a.
    
   0.678
T06_10875
Elongation factor 1-gamma.
   
   0.635
Herc4
Putative E3 ubiquitin-protein ligase HERC4.
    
 0.627
rps3-b
40S ribosomal protein S3-A.
    
   0.614
Rad23b
UV excision repair protein RAD23-like protein B.
   
   0.588
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.