Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kcnq1Potassium voltage-gated channel subfamily KQT member; Belongs to the potassium channel family. (528 aa)    
Predicted Functional Partners:
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.942
Rpl30
60S ribosomal protein L30.
   
 0.838
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.837
RPL21
60S ribosomal protein L21.
   
 0.835
mrpl-11
Putative 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 0.831
irk-1-2
Inward rectifier potassium channel irk-1.
   
 
 0.829
RPL31
60S ribosomal protein L31.
   
 0.828
Rpl34
60S ribosomal protein L34.
  
 0.826
RpL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.809
RpL18A
60S ribosomal protein L18a.
   
 0.809
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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