Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Map2k7Dual specificity mitogen-activated protein kinase kinase 7. (443 aa)    
Predicted Functional Partners:
Aplip1
JNK-interacting protein 1.
    
 0.995
bsk
Mitogen-activated protein kinase.
    
 0.995
Spag9
JNK-interacting protein.
    
 0.991
MAP2K4
Dual specificity mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.
    
  0.982
DUSP16
Dual specificity protein phosphatase 16.
    
 
 0.972
Map3k9
Mitogen-activated protein kinase kinase kinase 10.
    
 0.970
Tnni3k
Serine/threonine-protein kinase TNNI3K.
    
 0.952
MAP3K12
Mitogen-activated protein kinase kinase kinase.
    
 0.949
STRN
Striatin.
    
  0.944
Strn3
Striatin-3.
    
  0.944
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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