STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T06_10571Uncharacterized protein. (421 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
 0.638
T06_14402
Uncharacterized protein.
 
     0.523
T06_11700
Integrase catalytic domain-containing protein.
  
     0.523
T06_1996
Uncharacterized protein.
 
     0.510
T06_14238
Integrase_H2C2 domain-containing protein.
 
     0.501
T06_6913
Uncharacterized protein.
 
     0.495
T06_15881
Uncharacterized protein.
 
     0.487
T06_10484
Uncharacterized protein.
  
     0.485
T06_12179
Integrase catalytic domain-containing protein.
 
     0.485
T06_9217
Peptidase A2 domain-containing protein.
 
     0.482
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.