Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
StamSignal transducing adapter molecule 1. (464 aa)    
Predicted Functional Partners:
TSG101
Tumor susceptibility-like protein.
   
 0.996
snf8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
 0.995
T06_3337
TPX2 domain-containing protein.
   
 0.994
VPS28
Vacuolar protein sorting-associated protein 28-like protein; Belongs to the VPS28 family.
    
 0.994
chmp4b
Charged multivesicular body protein 4b.
     
 0.993
UBP19
Ubiquitin carboxyl-terminal hydrolase 19.
    
 0.989
T06_3171
Uncharacterized protein.
    
 0.985
ITSN1
Intersectin-1.
    
 0.984
PTPN23
Tyrosine-protein phosphatase non-receptor type 23.
   
 0.976
MAP2K1
Dual specificity mitogen-activated protein kinase-like kinase; Belongs to the protein kinase superfamily.
    
 0.974
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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