STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFDN5Prefoldin subunit 5. (162 aa)    
Predicted Functional Partners:
pfdn1
Prefoldin subunit 1.
   
 0.999
VBP1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
 0.999
PFDN4
Prefoldin subunit 4.
  
 0.998
PFDN2
Prefoldin subunit 2.
   
 0.998
cct-4
T-complex protein 1 subunit delta.
   
 0.945
Cct3
T-complex protein 1 subunit gamma.
   
 0.872
cct-2
T-complex protein 1 subunit beta.
   
 0.861
cct-1
T-complex protein 1 subunit alpha.
   
 0.860
PRP40B
T-complex protein 1 subunit eta.
   
 0.853
CCT6
T-complex protein 1 subunit zeta; Belongs to the TCP-1 chaperonin family.
   
 0.820
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.