Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_15161VWFA domain-containing protein. (480 aa)    
Predicted Functional Partners:
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.908
unc-10
Rab-3-interacting molecule unc-10.
    
 0.881
RpS15Aa
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
  0.702
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.693
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.660
asf1
Histone chaperone asf1.
    
 0.656
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.652
Rps11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.646
rpsa
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
    
 0.641
RPS19S
40S ribosomal protein S19S.
   
 0.640
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (20%) [HD]