Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mlc-3Myosin, essential light chain. (433 aa)    
Predicted Functional Partners:
mlc-4-2
Putative myosin regulatory light chain.
   
 0.997
MYO5A
Unconventional myosin-Va; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.974
mlc-1
Myosin regulatory light chain 1.
  
 0.957
Mlc-c
Myosin-2 essential light chain.
   
 
  0.927
tnc-2
Troponin C, isoform 2.
   
 0.925
cal-1-2
Calmodulin-like protein.
   
 0.925
unc-54
Myosin-4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.923
unc-15
Paramyosin.
   
 0.923
myo-3
Myosin-3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.923
zip
Myosin heavy chain, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.923
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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