Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHCYL2Putative adenosylhomocysteinase 3. (575 aa)    
Predicted Functional Partners:
Ahcy13
Adenosylhomocysteinase.
    
  0.984
Cbs
Cystathionine beta-synthase.
  
 0.952
cth-2
Putative cystathionine gamma-lyase 2.
  
 0.944
MTR
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.941
HMT1
Homocysteine S-methyltransferase 1.
  
 
 0.921
CCBL2
Kynurenine--oxoglutarate transaminase 3.
   
 0.900
tdcB
L-threonine dehydratase catabolic TdcB.
  
 
 0.894
Dnmt3a
DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.884
itr-1
Inositol 1,4,5-trisphosphate receptor itr-1.
    
 0.879
EPRS
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.849
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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