Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Trpm7Transient receptor potential cation channel trpm; Belongs to the transient receptor (TC 1.A.4) family. (1366 aa)    
Predicted Functional Partners:
Trpv6
Transient receptor potential cation channel subfamily V member 6; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.927
Trpv4
Transient receptor potential cation channel subfamily V member 4; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.927
T06_13283
Protein unc-80-like protein.
    
  0.914
GRIK3
Glutamate receptor ionotropic, kainate 3.
     
 0.914
Mcoln3
Mucolipin-3.
     
 0.848
trpgamma
Transient receptor potential-gamma protein; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.796
trp-1
Transient-receptor-potential-like protein; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.796
itr-1
Inositol 1,4,5-trisphosphate receptor itr-1.
   
 
 0.786
asic1
Acid-sensing ion channel 1; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
     
 0.770
mec-10
Degenerin mec-10; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
     
 0.770
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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