STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trpm7Transient receptor potential cation channel trpm; Belongs to the transient receptor (TC 1.A.4) family. (1366 aa)    
Predicted Functional Partners:
Mcoln3
Mucolipin-3.
     
 0.786
Trpv6
Transient receptor potential cation channel subfamily V member 6; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.780
Trpv4
Transient receptor potential cation channel subfamily V member 4; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.780
trpgamma
Transient receptor potential-gamma protein; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.692
trp-1
Transient-receptor-potential-like protein; Belongs to the transient receptor (TC 1.A.4) family.
    
0.692
Nudt9-3
ADP-ribose pyrophosphatase, mitochondrial.
 
    
 0.666
itr-1
Inositol 1,4,5-trisphosphate receptor itr-1.
   
 
 0.598
ANK1
Ankyrin-1; Belongs to the transient receptor (TC 1.A.4) family.
    
0.551
T06_15070
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.
      
 0.525
Atox1
Copper transport protein ATOX1.
      
 0.524
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.