Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
C05D9.3Putative integrin beta-like protein. (601 aa)    
Predicted Functional Partners:
pat-2
Integrin alpha pat-2; Belongs to the integrin alpha chain family.
   
 0.998
ina-1
Integrin alpha ina-1; Belongs to the integrin alpha chain family.
   
 0.993
pat-3
Integrin beta; Belongs to the integrin beta chain family.
     
  0.984
ILK
Integrin-linked protein kinase.
    
 0.970
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.948
TLN1
Talin-1.
   
 0.944
TLN1-2
Talin-1.
   
 0.944
unc-112
PH domain-containing protein.
   
 0.927
PARVB
Beta-parvin.
   
 0.926
HSPG2
Basement membrane proteoglycan.
     
 0.903
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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