Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Nim1Serine/threonine-protein kinase NIM1. (427 aa)    
Predicted Functional Partners:
APPL1
DCC-interacting protein 13-alpha.
    
  0.932
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.907
T06_10845
Caltractin.
    
 0.886
Tonsl
Tonsoku-like protein.
   
 
 0.853
Camkk1
Calcium/calmodulin-dependent protein kinase kinase 1.
  
 
0.828
ACAC
Acetyl-CoA carboxylase.
    
 0.799
PRKAG1
5'-AMP-activated protein kinase subunit gamma-1.
   
 0.797
PRKAG2
5'-AMP-activated protein kinase subunit gamma-2.
   
 0.797
SLC34A1-2
Transketolase-like protein 2.
     
 0.753
T06_13991
AMPK1_CBM domain-containing protein.
    
 0.750
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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