STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MpgDNA-3-methyladenine glycosylase. (218 aa)    
Predicted Functional Partners:
APEX2
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
    
 0.651
XRCC1
DNA repair protein XRCC1.
    
 
 0.532
T06_7481
Uncharacterized protein.
     
 0.521
T06_8659
Uncharacterized protein.
    
 0.507
T06_11959
Uncharacterized protein.
    
 0.507
T06_2345
Uncharacterized protein.
    
 0.507
T06_8438
Uncharacterized protein.
    
 0.507
T06_4200
Uncharacterized protein.
    
 0.507
T06_10198
Putative transposoin protein.
    
 0.507
T26G10.4
Reverse transcriptase domain-containing protein.
    
 0.507
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.