Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T06_15069Eukaryotic translation initiation factor 2A. (1359 aa)    
Predicted Functional Partners:
rps3-b
40S ribosomal protein S3-A.
   
  0.996
RPS4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
    
  0.994
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.993
RpS16
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
  0.991
Eif2s1
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.991
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.990
rps-26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
    
  0.989
Eif2s3y
Eukaryotic translation initiation factor 2 subunit 3.
   
 0.987
RPS19S
40S ribosomal protein S19S.
    
  0.984
RPS6
40S ribosomal protein S6.
    
 0.980
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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