Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BREBRCA1-A complex subunit BRE. (439 aa)    
Predicted Functional Partners:
T06_8113
LINE-1 reverse transcriptase-like protein.
    
 0.997
Brca2
Breast cancer type 2 susceptibility-like protein.
    
 0.991
mel-32
Serine hydroxymethyltransferase.
    
 0.988
RAD51
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
    
 0.987
T06_16318
BRCT domain-containing protein.
    
 0.934
T06_8311
BRCT domain-containing protein.
    
 0.934
BRCA1
Breast cancer type 1 susceptibility-like protein.
    
 0.934
BRCA1-2
Breast cancer type 1 susceptibility-like protein.
    
 0.934
Nfkb1
Nuclear factor NF-kappa-B subunit.
   
  0.923
CDC27
Cell division cycle protein 27-like protein.
    
  0.920
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.