Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REEP5-6Receptor expression-enhancing protein. (197 aa)    
Predicted Functional Partners:
RpS15Aa
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
    
 
 0.825
SLC25A46
Solute carrier family 25 member 46; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.713
T06_1025
Putative phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial.
      
 0.707
CCDC101
SAGA-associated factor 29-like protein.
    
   0.691
Mocs2-1
Molybdopterin synthase catalytic subunit 1.
    
   0.691
atl2
Atlastin-2.
    
 
 0.672
Reep5-9
Receptor expression-enhancing protein.
  
 
 
0.589
REEP5-7
Receptor expression-enhancing protein.
  
 
 
0.589
Tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
    0.577
RTN3
Reticulon-like protein.
   
 
 0.541
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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