STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T06_800Uncharacterized protein. (63 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.819
Egfr
Receptor protein-tyrosine kinase.
    
 0.565
Mob1b
Serine/threonine-protein phosphatase.
    
 0.543
Otud7b
OTU domain-containing protein 7B.
    
 0.518
SAK
Serine/threonine-protein kinase PLK4.
    
 0.514
Plk1
Serine/threonine-protein kinase PLK.
    
 0.514
PPP2R1A
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
    
  0.514
SIRT3
NAD-dependent protein deacetylase sirtuin-3, mitochondrial.
    
  0.511
LAMB1
Laminin subunit beta-1.
    
 0.483
PBDC1
Caskin-2.
    
 0.483
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.