STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tufm-2Elongation factor Tu, mitochondrial. (509 aa)    
Predicted Functional Partners:
T06_801
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 0.992
RpL5
60S ribosomal protein L5.
  
 
 0.985
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.985
MRPL1
39S ribosomal protein L1, mitochondrial.
  
 0.985
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.985
rpl-17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.985
mrpl-11
Putative 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
  
 0.985
RpS15Aa
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.985
MRPS10
28S ribosomal protein S10, mitochondrial.
  
 0.985
RPS18
40S ribosomal protein S18.
  
 
 0.985
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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