STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T06_10476Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
Sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.673
sod1
Superoxide dismutase [Cu-Zn].
   
 0.595
T06_6387
Uncharacterized protein.
   
 0.595
SOD1
Superoxide dismutase [Cu-Zn].
   
 0.595
ero-1
Endoplasmic oxidoreductin-1.
    
 0.586
TXNRD1
Thioredoxin reductase 1, cytoplasmic; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.533
Txnrd2
Thioredoxin reductase 2, mitochondrial.
   
 0.533
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.526
DLD
Dihydrolipoyl dehydrogenase.
   
 0.519
Vars
Valine--tRNA ligase.
  
 
 0.461
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.