STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EARS2Putative glutamate--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (558 aa)    
Predicted Functional Partners:
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
EPRS
Bifunctional glutamate/proline--tRNA ligase.
  
0.981
RPL21
60S ribosomal protein L21.
   
 0.979
Rpl30
60S ribosomal protein L30.
   
 0.979
RpL13A
60S ribosomal protein L13a.
  
 0.977
Rpl23a
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.977
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.974
RpL38
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.974
RpL5
60S ribosomal protein L5.
   
 0.973
RPL31
60S ribosomal protein L31.
   
 0.971
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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