STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plexBPlexin-B. (1932 aa)    
Predicted Functional Partners:
Cbl
E3 ubiquitin-protein ligase CBL.
    
 0.920
SEMA-2A
Semaphorin-2A; Belongs to the semaphorin family.
  
 
 0.911
SEMA-1A
Semaphorin-1A.
  
 
0.873
smp-1
Semaphorin-1A; Belongs to the semaphorin family.
  
 
0.870
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.859
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.833
SEMA5A
Semaphorin-5A.
    
 0.830
rho-1
Ras-like GTP-binding protein rhoA.
    
 0.827
PTPN23
Tyrosine-protein phosphatase non-receptor type 23.
   
 0.780
Egfr
Receptor protein-tyrosine kinase.
    
 0.762
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.