STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gtf3c2General transcription factor 3C polypeptide 2. (795 aa)    
Predicted Functional Partners:
GTF3C3
General transcription factor 3C polypeptide 3.
    
 0.915
Gtf3c1
General transcription factor 3C polypeptide 1.
   
 0.875
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.795
unc-89-3
Muscle M-line assembly protein unc-89.
    
 0.788
rpb-8
Putative DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
 0.743
Polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.710
tbp-1
TATA-box-binding protein.
    
 0.705
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.700
POLR3B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.694
BDP1
Transcription factor TFIIIB component B''-like protein.
    
 0.692
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.